Metagenomics News and Research

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Scientists Map Gene Sharing Networks in Wastewater Treatment Biofilms

Wastewater treatment systems are hotspots for mobile genetic elements proliferation and exchange, where dense biofilms create ideal conditions for horizontal gene transfer.

24 Mar 2026

Basecamp Research Selects PacBio HiFi Sequencing to Power Trillion Gene Atlas Initiative

PacBio, a leading provider of high-quality, long-read sequencing technologies, today announced that Basecamp Research, a frontier AI lab for therapeutic design, has selected PacBio HiFi sequencing on the Revio® system to generate large-scale environmental and host-associated metagenomic data for the Trillion Gene Atlas—a landmark scientific initiative designed to generate and model biological data at the trillion-gene scale.

From PacBio 23 Mar 2026

Gut Microbes Reshape Ovarian Aging in Mice

Findings indicate gut microbes impact ovarian function in mice, offering insights into reproductive aging and potential microbiome-based health interventions.

12 Mar 2026

Microplastics Reshape Soil Microbial Genes and Ecosystem Functions

Microplastics are now widely recognized as pollutants in oceans and waterways, but a growing body of research suggests they may pose equally serious risks on land.

24 Feb 2026

New Method Brings Precision to Monitoring Beneficial Bacteria After FMT

Researchers at the Icahn School of Medicine at Mount Sinai and their collaborators have developed a new technology to track beneficial bacteria after fecal microbiota transplants (FMT).

23 Oct 2025

How Defined Microbes Decide Chocolate Flavor

This study links microbial activity and fermentation conditions to cocoa flavor profiles, advancing techniques for producing premium chocolate consistently.

27 Aug 2025

Study Reveals TRF's Role in Reshaping Gut Microbiome and Metabolism

Metatranscriptomics uncovers how time-restricted feeding restores gut microbial cycles, offering insights into improving metabolic health and disease treatment.

20 Jun 2025

Metagenomic Study Examines Combined Effects of Global Change on Soil Microbes

Metagenomic analysis shows that combined global change factors reshape soil microbial composition and function, highlighting limits of single-stressor studies.

12 Jun 2025

New CRISPR Method Enhances Surveillance of Antibiotic Resistance in Wastewater

Antibiotic resistance is a global concern that threatens our ability to prevent and treat bacterial infections in humans and animals.

4 Mar 2025

Study Unveils Phage-Bacteria Dynamics in the Early Life Gut Microbiome

A world of microbes resides within the gut of every human being. This vast microbial community, the microbiome, which includes bacteria and viruses, has repeatedly demonstrated its ability to actively contribute to both health and disease.

26 Feb 2025

Sylph: A Fast and Accurate Tool for Species-Level Metagenome Profiling

Sylph's innovative approach to metagenome profiling delivers high accuracy and efficiency, advancing research in microbial diversity and disease associations.

21 Nov 2024

Transforming Microbiome Research with Single-Cell Genome Analysis

The human microbiome plays a critical role in our health, influencing everything from disease development to treatment responses.

8 Oct 2024

New Pipeline Studies Viruses in Humans and Coral Reefs

Tens of millions of still-unknown or poorly understood viruses have the potential to cause diseases, including new pandemics, and impact the health of valuable terrestrial and marine environments.

10 Jul 2024

CRISPR/Cas Biosensors Address Sensitivity and Specificity Challenges in Detection

The mechanisms of CRISPR-Cas-based biosensors.

5 Jun 2024

Rice University Develops AI-Powered Tools for Unraveling Microbial Genomes

Since the first microbial genome was sequenced in 1995, scientists have reconstructed the genomic makeup of hundreds of thousands of microorganisms and have even devised methods to take a census of bacterial communities on the skin, in the gut, or in soil, water and elsewhere based on bulk samples, leading to the emergence of a relatively new field of study known as metagenomics.

8 May 2024

Intermittent Energy Restriction Diet Alters Brain-Gut-Microbiome Axis

Worldwide, more than one billion people are obese. Obesity is a risk factor for cardiovascular disease, diabetes, and some cancers.

21 Dec 2023

How Next-Gen Sequencing is Revolutionizing Infection Diagnosis

Scientists from Necker-Enfants Malades Hospital (AP-HP), the Institut Pasteur, Université Paris Cité, Inserm, Université Paris-Est Créteil and the Alfort National Veterinary School, coordinated by Professor Marc Eloit and Dr. Anne Jamet in collaboration with Dr. Jacques Fourgeaud and Beatrice Regnault, studied the role of global genetic characterization of samples (or non-targeted metagenomics) using next-generation sequencing (mNGS) in diagnosing infections.

19 Dec 2023

Researchers Unveil Novel Protein Families and Functions in Microbial Communities

Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial communities, scientists have historically been unable to see beyond the beam -; worse, they didn't even know how big the room is.

12 Oct 2023

Study Highlights Potential Causes for Changing Foraging Habits of Bumblebees

A new study highlights potential causes for changing foraging habits of bumblebees. Using advanced molecular techniques called pollen metabarcoding, researchers investigated interactions between bumblebees and plants in Cuxhaven, Germany, and how they changed over 60 years.

11 Jul 2023

New AI-Assisted Methods to Discover Novel Deaminase Proteins with Unique Functions

At the Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences, GAO Caixia’s group has introduced the use of artificial intelligence (AI)-assisted techniques to find out novel deaminase proteins with special functions via structural prediction and classification.

28 Jun 2023